The complete mitochondrial genome of the Picasso panda clownfish(Perciformes:Pomacentridae)

Volume 8, Issue 1, February 2023     |     PP. 31-34      |     PDF (235 K)    |     Pub. Date: February 21, 2023
DOI: 10.54647/biology18255    62 Downloads     5229 Views  

Author(s)

HE Li-bin, Fisheries Research Institute of Fujian, Xiamen 361013, China
LUO Hui-yu, Fisheries Research Institute of Fujian, Xiamen 361013, China
ZHENG Le-yun, Fisheries Research Institute of Fujian, Xiamen 361013, China

Abstract
In this study, we determined the complete mitochondrial genome of the Picasso panda clownfish for the first time. The length of the whole mitogenome is 16,652 bp long and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, 2 non-coding regions and 1 control region(D-lop). The mitochondrial genome of the Picasso panda clownfish consisted of A = 29.19%, T = 25.49%, G = 15.93% and C = 29.40% (AT-skew = 0.067 and GC-skew = −0.297). Molecular phylogenetic analysis suggested that Amphiprion ocellaris, Amphiprion percula, Premnas biaculeatus and the Picasso panda clownfish clustered in one branch of the phylogenetic tree. Picasso panda clownfishand and A. ocellaris are most closely related.

Keywords
Mitochondrial genome; Pomacentridae; Picasso panda clownfish; Phylogeny

Cite this paper
HE Li-bin, LUO Hui-yu, ZHENG Le-yun, The complete mitochondrial genome of the Picasso panda clownfish(Perciformes:Pomacentridae) , SCIREA Journal of Biology. Volume 8, Issue 1, February 2023 | PP. 31-34. 10.54647/biology18255

References

[ 1 ] Andrews C. (1990). The ornamental fish trade and fish conservation. Journal of Fish Biology 37: 53-59.
[ 2 ] Hoff F.H. Jr. (1996) Conditioning, spawning and rearing of fish with emphasis on marine clownfish. Aquaculture Consultants Inc. Dade City,212pp.
[ 3 ] Katoh K, Misawa K, Kuma K, Miyata T.. (2002). MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14):3059–3066.
[ 4 ] Marcionetti A, Rossier V, Bertrand J A M, Litsios G,Salamin N.(2018). First draft genome of an iconic clownfish species (Amphiprion frenatus). Molecular Ecology Resources 18(5):1092-1101.
[ 5 ] Ronquist F, Teslenko M, vander Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. (2012). MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542.
[ 6 ] Lv YY, Li YP, Ruan ZQ, Bian C, You XX, Yang JX, Jiang WS, Shi Q. 2018. The complete mitochondrial genome of Glyptothorax macromaculatus provides a well-resolved molecular phylogeny of the Chinese sisorid catfishes. Genes. 9(6):282.
[ 7 ] Sun YN, Xu TJ. 2018. Complete mitochondrial genome of Caranx equula (Perciformes, Carangidae): genome characterization and phylogenetic analysis. Mitochondrial DNA B Resour. 3(2):786–787.